get_newfastq {icetea}R Documentation

Get data to create new ShortReadQ object after barcode trimming

Description

Get data to create new ShortReadQ object after barcode trimming

Usage

get_newfastq(type, fq_R1, fq_R2)

Arguments

type

character. expType of the CapSet object

fq_R1

character. fastq Read 1

fq_R2

character. fastq Read 2

Value

A list with new R1 and R2 sequence, quality, barcode string and sample id


[Package icetea version 1.6.1 Index]