getFlowFrame {ggcyto}R Documentation

extract flowFrame data structure from the given R object

Description

Mainly to get the channel and marker information.

Usage

getFlowFrame(x)

Arguments

x

flowSet, ncdfFlowList, GatingSet, GatingHierarchy, or GatingSetList

Value

a flowFrame. When x is a ncdfFlowSet or GatingSet that is associated with ncdfFlowSet, the raw event data is not read and an empty flowFrame is returned.

Examples

data(GvHD)
fs <- GvHD[1:2]
getFlowFrame(fs)# fs is a flowSet

dataDir <- system.file("extdata",package="flowWorkspaceData")
gs <- load_gs(list.files(dataDir, pattern = "gs_manual",full = TRUE))
getFlowFrame(gs)# gs is a GatingSet

[Package ggcyto version 1.16.0 Index]