recluster {fcoex} | R Documentation |
Recluster cells based on fcoex module composition
recluster( fc, hclust_method = "ward.D2", dist_method = "manhattan", k = 2, verbose = TRUE ) ## S4 method for signature 'fcoex' recluster( fc, hclust_method = "ward.D2", dist_method = "manhattan", k = 2, verbose = TRUE )
fc |
Object of class |
hclust_method |
method for the hclust function. Defaults to "ward.D2". |
dist_method |
method for the dist function. Defaults to "manhattan". |
k |
desired number of clustes. Defaults to 2. |
verbose |
Adds verbosity, defaults to TRUE. |
Object of class data.frame
with new clusters
data("fc") fc <- recluster(fc)