setRealCN {beadarraySNP}R Documentation

Integrate state information into SNP object

Description

Set calculated values of copy numbers in inferred element of AssayData slot

Usage

setRealCN(object, sample, cn.sum, subsample="OPA")

Arguments

object

class SnpSetIllumina

sample

sample identifier

cn.sum

list, see createCNSummary

subsample

"OPA"

Value

SnpSetIllumina object with inferred element of AssayData slot set

Author(s)

Jan Oosting

See Also

segmentate, alterCN, plotGoldenGate4OPA createCNSummary


[Package beadarraySNP version 1.54.0 Index]