GSE25055 {TNBC.CMS} | R Documentation |
This is a TNBC microarray dataset from GSE25055 contained in a
SummarizedExperiment
object. It includes gene expression profiles and
clinical information which can be accessed by the assays
and
colData
functions, respectively.
We obtained gene expression profiles of breast cancer
samples from the curatedBreastData
package and extracted
TNBC samples based on the expression profiles and
immunohistochemistry results.
https://bioconductor.org/packages/release/data/experiment/html/curatedBreastData.html
Hatzis, C. et al. (2011). A genomic predictor of response and survival following taxane-anthracycline chemotherapy for invasive breast cancer JAMA, 305, 1873-81.
data(GSE25055) #Access gene expression profiles head(assays(GSE25055)[[1]]) #Access clinical information head(colData(GSE25055))