stmFSC {SamSPECTRAL} | R Documentation |
This FCS file is used as demo data to illustrate SamSPECTRAL capabilities in identifying cell populations.
data(stm)
The is an FCS file.
Zare, H. and Shooshtari, P. and Gupta, A. and Brinkman R.B: Data Reduction for Spectral Clustering to Analyse High Throughput Flow Cytometry Data. BMC Bioinformatics, 2010, 11:403.
data(stm) # Read data files and transform them using log transform data.points <- stmFSC@exprs dimensions <- c(3,4,7) full <- log10(data.points[,dimensions]) plot(full, pch='.')