detectionCall {Rsubread} | R Documentation |
Use GC content adjusted background read counts to determine the detection p values for each gene
detectionCall( dataset, species = "hg", plot = FALSE)
dataset |
a character string giving the filename of a SAM format file, which is the output of read alignment. |
species |
a character string specifing the species. Options are |
plot |
logical indicating whether a density plot of detection p values will be generated. |
A data frame which includes detection p values and annotation information for each genes.
Zhiyin Dai and Wei Shi