addBroadTypes {GeneStructureTools} | R Documentation |
Change transcript biotypes to a broader set in a GRanges GTF object
addBroadTypes(gtf)
gtf |
GRanges object of the GTF |
GRanges object of the GTF with new transcript types
Beth Signal
Other gtf manipulation: UTR2UTR53
,
exonsToTranscripts
,
filterGtfOverlap
,
removeDuplicateTranscripts
,
removeSameExon
,
reorderExonNumbers
gtfFile <- system.file("extdata","example_gtf.gtf", package = "GeneStructureTools") gtf <- rtracklayer::import(gtfFile) gtf <- addBroadTypes(gtf)