getAnnotation {FoldGO} | R Documentation |
This method allows to retrieve annotation from MgsaSets
or GAFReader
class object in form of list contains GO term id's
as keys and Gene ID's as values
getAnnotation(object) ## S4 method for signature 'AnnotationReader' getAnnotation(object) ## S4 method for signature 'list' getAnnotation(object) ## S4 method for signature 'MgsaSets' getAnnotation(object) ## S4 method for signature ''NULL'' getAnnotation(object)
object |
- Object of |
list contains GO term id's as keys and Gene ID's as values
## Not run: gaf_path <- system.file("extdata", "gene_association.tair.lzma", package = "FoldGO", mustWork = TRUE) gaf <- GAFReader(file = gaf_path, geneid_col = 10) getAnnotation(gaf) ## End(Not run)