searchToquery {ENCODExplorer}R Documentation

Convert searchEncode output in queryEncode output.

Description

After processing to a basic search with the searchEncode function you can convert your result in a queryEncode output. Thus you can benefit from the collected metadata.

Usage

searchToquery(df = get_encode_df(), searchResults, quiet = TRUE)

Arguments

df

list of two data.frame containing ENCODE experiment and dataset metadata.

searchResults

the results set generated from searchEncode

quiet

logical enables to switch off the result summary information when setting at TRUE.

Details

The output is compatible with the dowload function.

Value

a list of two data.frames containing data about ENCODE experiments and datasets

Examples

search_res <- searchEncode(searchTerm = "switchgear elavl1", limit = "1")
res <- searchToquery(searchResults = search_res, quiet = TRUE)


[Package ENCODExplorer version 2.14.0 Index]