GetPatterns {EBSeq} | R Documentation |
'GetPatterns' generates all possible patterns in a multiple condition study.
GetPatterns(Conditions)
Conditions |
The names of the Conditions in the study. |
A matrix describe all possible patterns.
Ning Leng
Ning Leng, John A. Dawson, James A. Thomson, Victor Ruotti, Anna I. Rissman, Bart M.G. Smits, Jill D. Haag, Michael N. Gould, Ron M. Stewart, and Christina Kendziorski. EBSeq: An empirical Bayes hierarchical model for inference in RNA-seq experiments. Bioinformatics (2013)
Conditions = c("C1","C1","C2","C2","C3","C3") PosParti = GetPatterns(Conditions)