gpr_expression {CoRegFlux}R Documentation

Transform a logic gpr rule string to a list and then evaluate the continuous version of the rules

Description

Transform a logic gpr rule string to a list and then evaluate the continuous version of the rules

Usage

gpr_expression(gpr, expression)

Arguments

gpr

A gene-protein rules from the genome-scale metabolic model

expression

A numerical matrix corresponding to the gene expression. Rownames should contain gene names/ids while samples should be in columns.

Value

A numerical value corresponding to the evaluation of the flux based on the expression of the metabolic genes present in the gpr


[Package CoRegFlux version 1.4.0 Index]