consensusClustersTpm {CAGEr}R Documentation

Extracting consensus clusters tpm matrix from CAGEset object

Description

Extracts a table with normalized CAGE tag values for consensus clusters across all samples from a CAGEr object.

Usage

consensusClustersTpm(object)

## S4 method for signature 'CAGEset'
consensusClustersTpm(object)

## S4 method for signature 'CAGEexp'
consensusClustersTpm(object)

Arguments

object

A CAGEr object.

Value

Returns the matrix of normalized expression values of CAGE clusters across all samples.

Author(s)

Vanja Haberle

See Also

consensusClusters

Examples

head(consensusClustersTpm(exampleCAGEset))
head(consensusClustersTpm(exampleCAGEexp))


[Package CAGEr version 1.30.3 Index]