BiocSet {BiocSet} | R Documentation |
character()
The BiocSet
constructor, the show method, the slot
accessors, and creating a BiocSet
object from an element set
tibble rather than character vector(s).
BiocSet(..., active = c("elementset", "element", "set")) ## S4 method for signature 'BiocSet' show(object) es_element(x) ## S4 method for signature 'BiocSet' es_element(x) es_set(x) ## S4 method for signature 'BiocSet' es_set(x) es_elementset(x) ## S4 method for signature 'BiocSet' es_elementset(x) BiocSet_from_elementset(elementset, element, set)
... |
Named character() vectors of element sets. Each character vector is an element set. The name of the character vectors are the name of the sets. |
active |
A character to indicate which tibble is active. The default is "elementset". |
object |
A |
x |
A |
elementset |
A tibble with element set information. |
element |
A tibble with element information. |
set |
A tibble with set information. |
An S4 BiocSet
object shown as a tripple tibble, where each
slot is a tibble.
element
The element tibble from 'tbl_elementset'
set
The set tibble from 'tbl_elementset'
elementset
The elementset tibble created from user input
active
Character, indicates which tibble is active
BiocSet(set1 = letters, set2 = LETTERS) set.seed(123) element <- tibble( element = letters[1:10], v1 = sample(10), v2 = sample(10) ) set <- tibble( set = LETTERS[1:2], v1 = sample(2), v2 = sample(2) ) elementset <- tibble( element = letters[1:10], set = sample(LETTERS[1:2], 10, TRUE) ) BiocSet_from_elementset(elementset, element, set)