occugene

DOI: 10.18129/B9.bioc.occugene    

This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see occugene.

Functions for Multinomial Occupancy Distribution

Bioconductor version: 3.10

Statistical tools for building random mutagenesis libraries for prokaryotes. The package has functions for handling the occupancy distribution for a multinomial and for estimating the number of essential genes in random transposon mutagenesis libraries.

Author: Oliver Will <oliverrreader at gmail.com>

Maintainer: Oliver Will <oliverrreader at gmail.com>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("occugene")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("occugene")

 

PDF	R Script	occugene
PDF		Reference Manual

Details

biocViews	Annotation, Pathways, Software
Version	1.46.0
In Bioconductor since	BioC 2.2 (R-2.7) (12 years)
License	GPL (>= 2)
Depends	R (>= 2.0.0)
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	occugene_1.46.0.tar.gz
Windows Binary	occugene_1.46.0.zip
Mac OS X 10.11 (El Capitan)	occugene_1.46.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/occugene
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/occugene
Package Short Url	https://bioconductor.org/packages/occugene/
Package Downloads Report	Download Stats