demultiplex_info {scPipe} | R Documentation |
Get or set cell barcode demultiplx results in a SingleCellExperiment object
demultiplex_info(object) demultiplex_info(object) <- value demultiplex_info.sce(object) ## S4 method for signature 'SingleCellExperiment' demultiplex_info(object) ## S4 replacement method for signature 'SingleCellExperiment' demultiplex_info(object) <- value
object |
A |
value |
Value to be assigned to corresponding object. |
a dataframe of cell barcode demultiplex information
A DataFrame of cell barcode demultiplx results.
Luyi Tian
data("sc_sample_data") data("sc_sample_qc") sce = SingleCellExperiment(assays = list(counts = as.matrix(sc_sample_data))) organism(sce) = "mmusculus_gene_ensembl" gene_id_type(sce) = "ensembl_gene_id" QC_metrics(sce) = sc_sample_qc demultiplex_info(sce) = cell_barcode_matching UMI_dup_info(sce) = UMI_duplication demultiplex_info(sce)