QC_metrics {scPipe} | R Documentation |
Get or set quality control metrics in a SingleCellExperiment object
QC_metrics(object) QC_metrics(object) <- value QC_metrics.sce(object) ## S4 method for signature 'SingleCellExperiment' QC_metrics(object) ## S4 replacement method for signature 'SingleCellExperiment' QC_metrics(object) <- value
object |
A |
value |
Value to be assigned to corresponding object. |
a dataframe of quality control matrics
A DataFrame of quality control metrics.
Luyi Tian
data("sc_sample_data") data("sc_sample_qc") sce = SingleCellExperiment(assays = list(counts = as.matrix(sc_sample_data))) QC_metrics(sce) = sc_sample_qc head(QC_metrics(sce))