calcGraphOverlap {rBiopaxParser} | R Documentation |
This function calculates the overlap of supplied graph1 with graph2. Layout and weights of graph1 are kept.
calcGraphOverlap(graph1, graph2)
graph1 |
graphNEL |
graph2 |
graphNEL |
Returns a list containing the compared graphs and edge- and node-wise overlap between them.
Frank Kramer
# load data data(biopaxexample) pwid1 = "pid_p_100002_wntpathway" pwid2 = "pid_p_100146_hespathway" mygraph1 = pathway2RegulatoryGraph(biopax, pwid1) mygraph2 = pathway2RegulatoryGraph(biopax, pwid2) calcGraphOverlap(mygraph1,mygraph2)