plotTranscripts {psichomics}R Documentation

Plot transcripts

Description

Plot transcripts

Usage

plotTranscripts(info, eventPosition = NULL, event = NULL, shiny = FALSE)

Arguments

info

Information retrieved from Ensembl

eventPosition

Numeric: coordinates of the alternative splicing event (ignored if event is set)

event

Character: identifier of the alternative splicing event to plot

shiny

Boolean: is the function running in a Shiny session?

Value

NULL (function is only used to modify the Shiny session's state or internal variables)

See Also

Other functions to retrieve external information: ensemblToUniprot(), plotProtein(), queryEnsemblByGene()

Examples

event <- "SE_12_-_7985318_7984360_7984200_7982602_SLC2A14"
info  <- queryEnsemblByEvent(event, species="human", assembly="hg19")
## Not run: 
plotTranscripts(info, event=event)

## End(Not run)

[Package psichomics version 1.12.1 Index]