queryEnsemblByGene {psichomics} | R Documentation |
Query information from Ensembl
queryEnsemblByGene(gene, species = NULL, assembly = NULL) queryEnsemblByEvent(event, species, assembly)
gene |
Character: gene |
species |
Character: species (may be |
assembly |
Character: assembly version (may be NULL for an Ensembl identifier) |
event |
Character: alternative splicing event |
Information from Ensembl
Other functions to retrieve external information:
ensemblToUniprot()
,
plotProtein()
,
plotTranscripts()
queryEnsemblByGene("BRCA1", "human", "hg19") queryEnsemblByGene("ENSG00000139618") event <- "SE_17_-_41251792_41249306_41249261_41246877_BRCA1" queryEnsemblByEvent(event, species="human", assembly="hg19")