plotGraph {pandaR} | R Documentation |
plotGraph plots a bipartite graph
plotGraph(x)
x |
an object of class "panda" |
An matrix describing the subsetted bipartite network.
data(pandaToyData) pandaRes <- panda(pandaToyData$motif, pandaToyData$expression,pandaToyData$ppi,hamming=.001,progress=TRUE) topPandaRes <- topedges(pandaRes,1000) subnet.pandaRes <- subnetwork(topPandaRes,c("AR","ARID3A","ELK1")) plotGraph(subnet.pandaRes) data(pandaResult) topPandaRes <- topedges(pandaResult, 1000) subnet.pandaRes <- subnetwork(topPandaRes,c("AR","ARID3A","ELK1")) plotGraph(subnet.pandaRes)