openCyto.options {openCyto} | R Documentation |
Get/set some global options for openCyto
opt <- getOption("openCyto") #the threshold of minimum cell events required for the gating algorithm to proceed opt[["gating"]][["minEvents"]] #to change the threshold opt[["gating"]][["minEvents"]] <- 100 options(openCyto = opt) #switch off the validity check flags(Not recommended) opt[["check.pop"]] <- FALSE options(openCyto = opt)