mean_trend_design_mat {microbiomeDASim}R Documentation

Create Design Matrix for mean_trend function

Description

By taking in the user specified parameters, we can return a design matrix to use when creating the differential longitudinal abundance.

Usage

mean_trend_design_mat(form, beta, IP, timepoints)

Arguments

form

character value specifying the type of time trend. Options include 'linear', 'quadratic', 'cubic', 'M', 'W', 'L_up', and 'L_down'.

beta

vector specifying the appropriate parameters for functional trend. See details of mean_trend for explanation for each form

IP

vector specifying the inflection points. See details of mean_trend for explanation for each form

timepoints

numeric vector specifying the points to fit the functional trend.

Value

Numeric matrix with values that will be used to generate functional trends


[Package microbiomeDASim version 1.0.0 Index]