mlfo {metaseqR}R Documentation

MLE dispersion estimate

Description

MLE function used to estimate negative binomial dispersions from real RNA-Seq data, as in (Soneson and Delorenzi, BMC Bioinformatics, 2013) and (Robles et al., BMC Genomics, 2012). Internal use.

Usage

    mlfo(phi, y)

Arguments

phi

the parameter to be optimized.

y

count samples used to perform the optimization.

Value

The objective function value.

Author(s)

Panagiotis Moulos

Examples


# Not yet available


[Package metaseqR version 1.26.0 Index]