msigdb_download_one {hypeR}R Documentation

Fetch gsets from msigdb

Description

Fetch gsets from msigdb

Usage

msigdb_download_one(species = "Homo sapiens", category,
  subcategory = "")

Arguments

species

A species to determine gene symbols (refer to ?msigdbr::msigdbr for avilable species)

category

Gene set category (refer to ?msigdbr::msigdbr for avilable categories)

subcategory

Gene set subcategory (refer to ?msigdbr::msigdbr for avilable subcategories)

Value

A list of gene sets

Examples

HALLMARK <- msigdb_download_one("Homo sapiens", "H", "")


[Package hypeR version 1.2.0 Index]