msigdb_download_all {hypeR} | R Documentation |
Download all gsets from msigdb for a species
msigdb_download_all(species = "Homo sapiens", output_dir = NULL)
species |
A species to determine gene symbols (refer to ?msigdbr::msigdbr for avilable species) |
output_dir |
A directory path where gene sets are downloaded instead of to the package location |
A list containing the output directory and version number of gene sets
msigdb_path <- msigdb_download_all("Homo sapiens")