plotMASwish {fishpond} | R Documentation |
MA plot
plotMASwish(y, alpha = 0.05, sigcolor = "blue", ...)
y |
a SummarizedExperiment (see |
alpha |
the FDR threshold for coloring points |
sigcolor |
the color for the significant points |
... |
passed to plot |
nothing, a plot is displayed
y <- makeSimSwishData() y <- scaleInfReps(y) y <- labelKeep(y) y <- swish(y, x="condition") plotMASwish(y)