ridgeplot {enrichplot} | R Documentation |
ridgeline plot for GSEA result
ridgeplot(x, showCategory = 30, fill = "p.adjust", core_enrichment = TRUE) ## S4 method for signature 'gseaResult' ridgeplot(x, showCategory = 30, fill = "p.adjust", core_enrichment = TRUE) ridgeplot.gseaResult( x, showCategory = 30, fill = "p.adjust", core_enrichment = TRUE )
x |
gseaResult object |
showCategory |
number of categories for plotting |
fill |
one of "pvalue", "p.adjust", "qvalue" |
core_enrichment |
whether only using core_enriched genes |
ggplot object
Guangchuang Yu
library(DOSE) data(geneList) x <- gseDO(geneList) ridgeplot(x)