getNormalizedCountsSE {deltaCaptureC}R Documentation

Get normalized counts

Description

This function takes a SummarizedExperiment giving the the counts for each replicate of the two treatments and computes and affixes an assay giving the normalized version of these counts.

Usage

getNormalizedCountsSE(se)

Arguments

se

A SummarizedExperiment with an assay called counts giving the raw counts for each replicate of the two treatments.

Value

A SummarizedExperiment including a an assay of the normalized counts called normalizedCounts.

Examples

miniSENormalized = getNormalizedCountsSE(miniSE)

[Package deltaCaptureC version 1.0.0 Index]