cola_opt {cola}R Documentation

Global Parameters

Description

Global Parameters

Usage

cola_opt(..., RESET = FALSE, READ.ONLY = NULL, LOCAL = FALSE, ADD = FALSE)

Arguments

...

Arguments for the parameters, see "details" section

RESET

reset to default values

READ.ONLY

please ignore

LOCAL

please ignore

ADD

please ignore

Details

There are following global parameters:

group_diff

Used in get_signatures,ConsensusPartition-method.

fdr_cutoff

Used in get_signatures,ConsensusPartition-method.

color_set_2

Colors for the predicted classes.

Examples

cola_opt
cola_opt$group_diff = 0.2  # e.g. for methylation datasets
cola_opt$fdr_cutoff = 0.1  # e.g. for methylation datasets
cola_opt
cola_opt(RESET = TRUE)

[Package cola version 1.2.1 Index]