threshold {cobindR} | R Documentation |
threshold used in motif hit finding
## S4 method for signature 'configuration' threshold(x) ## S4 replacement method for signature 'configuration,numeric' threshold(x) <- value
x |
a cobindR configuration object |
value |
the hit threshold |
threshold (numeric)
Rob Lehmann <r.lehmann@biologie.hu-berlin.de>
id
,experiment_description
,sequence_source
,sequence_origin
,sequence_type
,bg_sequence_source
,bg_sequence_origin
,bg_sequence_type
,species
,downstream
,upstream
,max_distance
,pairs
,pfm_path
,threshold
,fdrThreshold
,path
,mart
,pValue
cfg <- cobindRConfiguration() threshold(cfg)