createAnnotation {cn.farms} | R Documentation |
Annotation files for cn.farms are created
createAnnotation(filenames = NULL, annotation = NULL, annotDir = NULL, checks = TRUE)
filenames |
An absolute path of the CEL files to process. |
annotation |
Optional parameter stating the annotation from a pd-mapping. |
annotDir |
Optional parameter stating where the annotation should go. |
checks |
States if sanity checks should be done. |
NULL
The annotation files used for cn.farms will be placed in the current work directory under annotations.
Djork-Arne Clevert okko@clevert.de and Andreas Mitterecker mitterecker@bioinf.jku.at
## Not run: library("hapmapsnp6") celDir <- system.file("celFiles", package = "hapmapsnp6") filenames <- dir(path = celDir, full.names = TRUE) createAnnotation(filenames = filenames) ## End(Not run)