readGctxMeta {cTRAP}R Documentation

Parse row or column metadata from GCTX files

Description

Parse row or column metadata from GCTX files

Usage

readGctxMeta(gctx_path, dimension = "row", ids = NULL,
  set_annot_rownames = TRUE)

Arguments

gctx_path

the path to the GCTX file

dimension

which metadata to read (row or column)

ids

a character vector of a subset of row/column ids for which to read the metadata

set_annot_rownames

a boolean indicating whether to set the rownames addtribute of the returned data.frame to the corresponding row/column ids.

Value

a data.frame of metadata

Source

https://github.com/cmap/cmapR

See Also

Other GCTX parsing functions: fix.datatypes, processIds, readGctxIds


[Package cTRAP version 1.4.0 Index]