prepareGSEApathways {cTRAP} | R Documentation |
Prepare GSEA pathways
prepareGSEApathways(diffExprGenes, geneSize)
diffExprGenes |
Numeric: named vector of differentially expressed genes whose names are gene identifiers and respective values are a statistic that represents significance and magnitude of differentially expressed genes (e.g. t-statistics) |
geneSize |
Number: top and bottom number of differentially expressed
genes for gene set enrichment (only used if |
List of top and bottom differentially expressed genes