pathway.visualization {TRONCO}R Documentation

pathway.visualization

Description

Visualise pathways informations

Usage

pathway.visualization(x, title = paste("Pathways:",
  paste(names(pathways), collapse = ", ", sep = "")), file = NA,
  pathways.color = "Set2", aggregate.pathways, pathways, ...)

Arguments

x

A TRONCO complian dataset

title

Plot title

file

To generate a PDF a filename have to be given

pathways.color

A RColorBrewer color palette

aggregate.pathways

Boolean parameter

pathways

Pathways

...

Additional parameters

Value

plot information


[Package TRONCO version 2.18.0 Index]