plot_correlations {ReactomeGSA} | R Documentation |
Plots correlations of the average fold-changes of all pathways between the different datasets. This function is only available to GSA based results (not GSVA ones).
plot_correlations(x)
x |
ReactomeAnalysisResult. The result object to use as input |
A list of ggplot2 plot objects representing one plot per combination
Other ReactomeAnalysisResult functions: get_result
,
names,ReactomeAnalysisResult-method
,
open_reactome
, pathways
,
plot_volcano
, reactome_links
,
result_types
# load an example result library(ReactomeGSA.data) data(griss_melanoma_result) # create the correlation plots plot_objs <- plot_correlations(griss_melanoma_result) # only one plot created for this result as it contains two datasets length(plot_objs) # show the plot using `print(plot_objs[[1]])`