pathways {ReactomeGSA}R Documentation

pathways

Description

Combines and returns the pathways of all analysed datasets.

Usage

pathways(x, ...)

Arguments

x

ReactomeAnalysisResult.

...

Additional parameters for specific implementations.

Value

A data.frame containing all merged pathways.

See Also

Other ReactomeAnalysisResult functions: get_result, names,ReactomeAnalysisResult-method, open_reactome, plot_correlations, plot_volcano, reactome_links, result_types

Examples

# load an example result
library(ReactomeGSA.data)
data(griss_melanoma_result)

# get the combined pathway result
pathway_result <- pathways(griss_melanoma_result)

head(pathway_result)

[Package ReactomeGSA version 1.0.0 Index]