write.geno {LEA} | R Documentation |
geno
formatWrite a file in the geno
format.
write.geno(R, output.file)
R |
A matrix containing the genotypes with one line for each individual and one column for each SNP. The missing genotypes have to be encoded with the value 9. |
output.file |
A character string containing a path to the output file,
a genotypic matrix in the |
output.file |
A character string containing a path to the output file,
a genotypic matrix in the |
Eric Frichot
read.geno
geno
snmf
geno2lfmm
lfmm2geno
ancestrymap2geno
ped2geno
vcf2geno
# Creation of a file called "genotypes.geno" in the working directory, # with 1000 SNPs for 165 individuals. data("tutorial") # Write R in a file called "genotypes.geno". # Create file: "genotypes.geno". write.geno(tutorial.R,"genotypes.geno") # Read the file "genotypes.geno". R = read.geno("genotypes.geno")