read.geno {LEA} | R Documentation |
geno
formatRead a file in the geno
format.
read.geno(input.file)
input.file |
A character string containing a path to the input file,
a genotypic matrix in the |
R |
A matrix containing the genotypes with one line for each individual and one column for each SNP. |
Eric Frichot
write.geno
geno
snmf
geno2lfmm
lfmm2geno
ancestrymap2geno
ped2geno
vcf2geno
# tutorial contains a matrix of genotypes R with 1000 SNPs for 165 individuals. # and a matrix with an environmental variable C. data("tutorial") # Write R in a file called "genotypes.geno". # Create file: "genotypes.geno". write.geno(tutorial.R,"genotypes.geno") # Read the file "genotypes.geno". R = read.geno("genotypes.geno")