glb_checks {GAPGOM}R Documentation

GAPGOM internal - Global argument checks

Description

These functions are internal functions and should not be called by the user.

Usage

.check_ifclass(obj, classname, objname, accept_null = TRUE)

.check_gos(gos)

.check_custom_gene(cus_gen)

.check_idtype(idtype, organism)

.check_organism(organism)

.check_ontology(ontology)

.check_method(method)

Details

These check make sure that user input is correct for both TopoICSim and lncRNApred. They mainly include very generalistic checks.

Value

output is different on a case-to-case basis, but is a boolean determining if the input is correct.

Notes

Internal functions used in both algorithms.


[Package GAPGOM version 1.2.0 Index]