runibic: row-based biclustering algorithm for analysis of gene expression data in R


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Documentation for package ‘runibic’ version 1.8.0

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runibic-package runibic: parallel row-based biclustering algorithm for analysis of gene expression data in R
backtrackLCS Retrieving a Longest Common Subsequence between two integer vectors.
BCUnibic runibic: parallel row-based biclustering algorithm for analysis of gene expression data in R
BCUnibic-class Class BCUnibic
BCUnibicD runibic: parallel row-based biclustering algorithm for analysis of gene expression data in R
BCUnibicD-class Class BCUnibicD
calculateLCS Calculate all Longest Common Subsequences between a matrix.
cluster Calculate biclusters from sorted list of LCS scores and row indices
pairwiseLCS Calculate a matrix of Longest Common Subsequence (LCS) between a pair of numeric vectors
runibic runibic: parallel row-based biclustering algorithm for analysis of gene expression data in R
runiDiscretize Discretize an input matrix
set_runibic_params Set the parameters for runibic algorithm
unisort Computing the indexes of j-th smallest values of each row