EDDA-package |
Experimental Design in Differential Abundance analysis |
BP |
BaySeq Profile used in simulations by Hardcastle et al |
computeAUC |
compute AUC values. |
EDDA |
Experimental Design in Differential Abundance analysis |
generateData |
generate count data |
HBR |
Average abundance for RNA-seq data from Human Brain Reference. |
plotPRC |
plot precision-recall curves |
plotROC |
plot Receiver Operating Characteristic curve |
SingleCell |
Single-cell RNA-seq data for model free simulation |
testDATs |
Run differential abundance testings |
Wu |
Average abundance for RNA-seq data from schizophrenia. |