Gene Ontology Enrichment Analysis

Species

A long list of species is included. Select the wanted species in the drop down menu.

If you experience any problems with any of the species, please contact us by sending an e-mail to the PeptideShaker Google Group or by reporting an issue at the PeptideShaker homepage.

As a default only human GO term to protein mappings are included. The other species can be downloaded if needed. Simply select the species in the drop down menu and click the Download button to start downloading the GO term to protein mappings for that species. For species where the mappings already have been downloaded these can be updated to the current release of Ensembl by clicking the Update button.


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Ensembl Version

PeptideShaker always uses the latest version of Ensembl when downloading the GO term to protein mappings. The version used for a given species is shown behind the species name in the species drop down menu. Ensembl is updated with the latest data on a monthly basis and each version is given a number, e.g., Ensembl 66.


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