Build IGV tracks and HTML reports


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Documentation for package ‘tracktables’ version 1.2.3

Help Pages

igvParam Parameters for displaying bigwigs, bams and intervals in IGV
igvParam-class Parameters for displaying bigwigs, bams and intervals in IGV
Intervals Example genomic intervals
makebedtable Make HTML pages for interval files or GRanges.
MakeIGVSampleMetadata Make sample metadata file for use with IGV.
MakeIGVSession Make IGV session XML and sample information file
MakeIGVSessionXML Make IGV session XML
maketracktable Make HTML pages for IGV sessions (Tracktables Experiment Report)