ancestries | Sample Chromosomal Proportions of Ancestral Subpopulations to Use for CAnD Testing |
barPlotAncest | Create a Barplot of Ancestry Proportion Estimates for Every Sample and a Given Chromosome or Chromosomal Region |
BonfCorr | ~~ Methods for Function 'BonfCorr' ~~ |
BonfCorr-method | ~~ Methods for Function 'BonfCorr' ~~ |
BonfCorr-methods | ~~ Methods for Function 'BonfCorr' ~~ |
CAnD | Peform the CAnD Test |
CAnDResult-class | Class '"CAnDResult"' |
getDiffMatrices | Calculate the Mean Ancestry Proportion Excluding Each Chromosome/Chromosomal Segment in Turn |
nonParam_CAnD | Perform the Non-Parametric CAnD Test |
overallpValue | ~~ Methods for Function 'overallpValue' ~~ |
overallpValue-method | ~~ Methods for Function 'overallpValue' ~~ |
overallpValue-methods | ~~ Methods for Function 'overallpValue' ~~ |
overallStatistic | ~~ Methods for Function 'overallStatistic' ~~ |
overallStatistic-method | ~~ Methods for Function 'overallStatistic' ~~ |
overallStatistic-methods | ~~ Methods for Function 'overallStatistic' ~~ |
plotPvals | Create a Plot of P-Values for Each Chromosome or Chromosomal Region |
pValues | ~~ Methods for Function 'pValues' ~~ |
pValues-method | ~~ Methods for Function 'pValues' ~~ |
pValues-methods | ~~ Methods for Function 'pValues' ~~ |
test | ~~ Methods for Function 'test' ~~ |
test-method | ~~ Methods for Function 'test' ~~ |
test-methods | ~~ Methods for Function 'test' ~~ |