To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("FunciSNP.data")

In most cases, you don't need to download the package archive at all.

FunciSNP.data

Various data sets for use with the FunciSNP package

Bioconductor version: 3.0

Data sets needed for FunciSNP to integrate information from GWAS, 1000genomes and chromatin feature, in order to identify functional SNP in coding or non-coding regions.

Author: Simon G. Coetzee <simon at simoncoetzee.com> and Houtan Noushmehr, PhD <houtan at usp.br>

Maintainer: Simon G. Coetzee <scoetzee at gmail.com>

Citation (from within R, enter citation("FunciSNP.data")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("FunciSNP.data")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("FunciSNP.data")

PDF	R Script	FunciSNP Vignette
PDF		Reference Manual
Text		NEWS

Details

biocViews	Annotation, DataImport, DataRepresentation, ExperimentData, Infrastructure, SequenceMatching
Version	1.1.0
License	GPL-3
Depends	R (>= 2.14.0)
Imports	rtracklayer
LinkingTo
Suggests
SystemRequirements
Enhances
URL	http://coetzeeseq.usc.edu/publication/Coetzee_SG_et_al_2012/
Depends On Me	FunciSNP
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	FunciSNP.data_1.1.0.tar.gz
Windows Binary	FunciSNP.data_1.1.0.zip
Mac OS X 10.6 (Snow Leopard)	FunciSNP.data_1.1.0.tgz
Mac OS X 10.9 (Mavericks)	FunciSNP.data_1.1.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats

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