To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Ptroglodytes.UCSC.panTro2")
In most cases, you don't need to download the package archive at all.
Bioconductor version: 3.0
Full genome sequences for Pan troglodytes (Chimp) as provided by UCSC (panTro2, Mar. 2006) and stored in Biostrings objects.
Author: The Bioconductor Dev Team
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
Citation (from within R,
enter citation("BSgenome.Ptroglodytes.UCSC.panTro2")):
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Ptroglodytes.UCSC.panTro2")
| Reference Manual |
| biocViews | AnnotationData, BSgenome, Genetics, Pan_troglodytes |
| Version | 1.4.0 |
| License | Artistic-2.0 |
| Depends | BSgenome(>= 1.33.5) |
| Imports | BSgenome |
| LinkingTo | |
| Suggests | GenomicFeatures |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | BSgenome.Ptroglodytes.UCSC.panTro2.masked |
| Imports Me | BSgenome.Ptroglodytes.UCSC.panTro2.masked |
| Suggests Me |
Follow Installation instructions to use this package in your R session.
| Package Source | BSgenome.Ptroglodytes.UCSC.panTro2_1.4.0.tar.gz |
| Windows Binary | BSgenome.Ptroglodytes.UCSC.panTro2_1.4.0.zip |
| Mac OS X 10.6 (Snow Leopard) | BSgenome.Ptroglodytes.UCSC.panTro2_1.4.0.tgz |
| Mac OS X 10.9 (Mavericks) | BSgenome.Ptroglodytes.UCSC.panTro2_1.4.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
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