To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("domainsignatures")
In most cases, you don't need to download the package archive at all.
Bioconductor version: 3.0
Find significantly enriched gene classifications in a list of functionally undescribed genes based on their InterPro domain structure.
Author: Florian Hahne, Tim Beissbarth
Maintainer: Florian Hahne <florian.hahne at novartis.com>
Citation (from within R,
enter citation("domainsignatures")):
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("domainsignatures")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("domainsignatures")
| R Script | Gene set enrichment using InterPro domain signatures | |
| Reference Manual |
| biocViews | Annotation, GeneSetEnrichment, Pathways, Software |
| Version | 1.26.0 |
| In Bioconductor since | BioC 2.3 (R-2.8) |
| License | Artistic-2.0 |
| Depends | R (>= 2.4.0), KEGG.db, prada, biomaRt, methods |
| Imports | AnnotationDbi |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Follow Installation instructions to use this package in your R session.
| Package Source | domainsignatures_1.26.0.tar.gz |
| Windows Binary | domainsignatures_1.26.0.zip |
| Mac OS X 10.6 (Snow Leopard) | domainsignatures_1.26.0.tgz |
| Mac OS X 10.9 (Mavericks) | domainsignatures_1.26.0.tgz |
| Browse/checkout source | (username/password: readonly) |
| Package Downloads Report | Download Stats |
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