To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("GSEABase")

In most cases, you don't need to download the package archive at all.

GSEABase

Gene set enrichment data structures and methods

Bioconductor version: 3.0

This package provides classes and methods to support Gene Set Enrichment Analysis (GSEA).

Author: Martin Morgan, Seth Falcon, Robert Gentleman

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("GSEABase")):

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("GSEABase")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GSEABase")

biocViews	GeneExpression, GeneSetEnrichment, GraphAndNetwork, Software
Version	1.28.0
In Bioconductor since	BioC 2.1 (R-2.6)
License	Artistic-2.0
Depends	R (>= 2.6.0), BiocGenerics(>= 0.3.2), Biobase(>= 2.17.8), annotate, methods, graph(>= 1.37.2)
Imports	AnnotationDbi, XML
LinkingTo
Suggests	hgu95av2.db, GO.db, org.Hs.eg.db, Rgraphviz, ReportingTools
SystemRequirements
Enhances
URL
Depends On Me	AGDEX, BicARE, gCMAP, GSVAdata, npGSEA, PROMISE
Imports Me	Category, categoryCompare, cellHTS2, gCMAPWeb, GSRI, GSVA, HTSanalyzeR, PCpheno, phenoTest, PROMISE, ReportingTools
Suggests Me	BiocCaseStudies, gage, GlobalAncova, globaltest, GOstats, GSAR, GSEAlm, PGSEA, phenoTest
Build Report

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