Bioconductor version: 2.9
Classes for storing very large GWAS data sets and annotation, and functions for GWAS data cleaning and analysis.
Author: Stephanie Gogarten, Cathy Laurie, Tushar Bhangale, Matt Conomos, Cecilia Laurie, Caitlin McHugh, Ian Painter, Xiuwen Zheng, Rohit Swarnkar
Maintainer: Stephanie Gogarten <sdmorris at u.washington.edu>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("GWASTools")
To cite this package in a publication, start R and enter:
citation("GWASTools")
| R Script | GWAS Data Cleaning | |
| Reference Manual |
| biocViews | SNP, GeneticVariability, QualityControl, Microarray |
| Depends | Biobase, ncdf, GWASExactHW, sandwich |
| Imports | methods, DBI, RSQLite, DNAcopy, survival |
| Suggests | GWASdata, RUnit, gdsfmt, SNPRelate |
| System Requirements | |
| License | Artistic-2.0 |
| URL | |
| Depends On Me | GWASdata |
| Imports Me | |
| Suggests Me | |
| Version | 1.0.0 |
| Since | Bioconductor 2.9 (R-2.14) |
| Package Source | GWASTools_1.0.0.tar.gz |
| Windows Binary | GWASTools_1.0.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | GWASTools_1.0.0.tgz |
| Package Downloads Report | Download Stats |
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