DTA-package | Dynamic Transcriptome Analysis |
cDTAreliable | cDTA reliable ORFs |
cDTAtnumber | cDTA tnumber |
datamat | DTA datamat |
DTA | Dynamic Transcriptome Analysis |
DTA.dynamic.estimate | Estimation of synthesis and decay rates upon perturbation |
DTA.dynamic.generate | Simulation of DTA experiments upon perturbation |
DTA.estimate | Estimation of synthesis and decay rates |
DTA.generate | Simulation of DTA experiments |
DTA.phenomat | Create a phenomat that suits your experiment |
DTA.plot.it | Plots in any format and any quality |
orfs_ribig | Ribosome biogenesis genes |
orfs_rpg | Ribosomal protein genes |
orfs_stress | ISA stress module |
orfs_tf | Transcription factors |
phenomat | DTA phenomat |
reliable | DTA reliable ORFs |
RPdatamat | DTA RPdatamat |
RPphenomat | cDTA RPphenomat |
tDTAdatamat | tDTA datamat |
tDTAphenomat | tDTA phenomat |
tDTAreliable | tDTA reliable ORFs |
tDTAtnumber | tDTA tnumber |
tls | Weighted Total Least Square Regression |
tnumber | DTA tnumber |
WTdatamat | cDTA WTdatamat |
WTphenomat | cDTA WTphenomat |