Dynamic Transcriptome Analysis


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Documentation for package ‘DTA’ version 1.0.0

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DTA-package Dynamic Transcriptome Analysis
cDTAreliable cDTA reliable ORFs
cDTAtnumber cDTA tnumber
datamat DTA datamat
DTA Dynamic Transcriptome Analysis
DTA.dynamic.estimate Estimation of synthesis and decay rates upon perturbation
DTA.dynamic.generate Simulation of DTA experiments upon perturbation
DTA.estimate Estimation of synthesis and decay rates
DTA.generate Simulation of DTA experiments
DTA.phenomat Create a phenomat that suits your experiment
DTA.plot.it Plots in any format and any quality
orfs_ribig Ribosome biogenesis genes
orfs_rpg Ribosomal protein genes
orfs_stress ISA stress module
orfs_tf Transcription factors
phenomat DTA phenomat
reliable DTA reliable ORFs
RPdatamat DTA RPdatamat
RPphenomat cDTA RPphenomat
tDTAdatamat tDTA datamat
tDTAphenomat tDTA phenomat
tDTAreliable tDTA reliable ORFs
tDTAtnumber tDTA tnumber
tls Weighted Total Least Square Regression
tnumber DTA tnumber
WTdatamat cDTA WTdatamat
WTphenomat cDTA WTphenomat