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spliceSites

Manages align gap positions from RNA-seq data

Bioconductor version: 2.14

Align gap positions from RNA-seq data

Author: Wolfgang Kaisers

Maintainer: Wolfgang Kaisers <kaisers at med.uni-duesseldorf.de>

Citation (from within R, enter citation("spliceSites")):

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("spliceSites")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("spliceSites")

PDF	R Script	RNA-seq
PDF		Reference Manual

biocViews	DifferentialExpression, GeneExpression, Proteomics, RNASeq, Software
Version	1.2.0
In Bioconductor since	BioC 2.13 (R-3.0)
License	GPL-2
Depends	methods, rbamtools, refGenome (>= 1.1.2), doBy, Biobase, Biostrings(>= 2.28.0), seqLogo
Imports	BiocGenerics
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