To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("logicFS")

In most cases, you don't need to download the package archive at all.

logicFS

Identification of SNP Interactions

Bioconductor version: 2.14

Identification of interactions between binary variables using Logic Regression. Can, e.g., be used to find interesting SNP interactions. Contains also a bagging version of logic regression for classification.

Author: Holger Schwender

Maintainer: Holger Schwender <holger.schw at gmx.de>

Citation (from within R, enter citation("logicFS")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("logicFS")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("logicFS")

 

PDF R Script logicFS Manual
PDF   Reference Manual

Details

biocViews Classification, Genetics, SNP, Software
Version 1.34.0
In Bioconductor since BioC 1.8 (R-2.3)
License LGPL (>= 2)
Depends LogicReg, mcbiopi
Imports
Suggests genefilter, siggenes
System Requirements
URL
Depends On Me
Imports Me
Suggests Me trio

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source logicFS_1.34.0.tar.gz
Windows Binary logicFS_1.34.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) logicFS_1.34.0.tgz
Mac OS X 10.9 (Mavericks) logicFS_1.34.0.tgz
Browse/checkout source (username/password: readonly)
Package Downloads Report Download Stats

Workflows »

Common Bioconductor workflows include:

 

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center

Contact us: support.bioconductor.org

Hosting provided by Fred Hutchinson Cancer Research Center

Copyright © 2003 - 2014