To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("goseq")

In most cases, you don't need to download the package archive at all.

goseq

Gene Ontology analyser for RNA-seq and other length biased data

Bioconductor version: 2.14

Detects Gene Ontology and/or other user defined categories which are over/under represented in RNA-seq data

Author: Matthew Young

Maintainer: Nadia Davidson <nadia.davidson at mcri.edu.au>

Citation (from within R, enter citation("goseq")):

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("goseq")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("goseq")

PDF	R Script	goseq User's Guide
PDF		Reference Manual

biocViews	GO, GeneExpression, RNASeq, Sequencing, Software, Transcription
Version	1.16.2
In Bioconductor since	BioC 2.6 (R-2.11)
License	LGPL (>= 2)
Depends	R (>= 2.11.0), BiasedUrn, geneLenDataBase
Imports	mgcv, graphics, stats, utils, AnnotationDbi
Suggests	GO.db, edgeR, org.Hs.eg.db, rtracklayer
System Requirements
URL
Depends On Me
Imports Me
Suggests Me	oneChannelGUI

Follow Installation instructions to use this package in your R session.

Common Bioconductor workflows include:

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!