To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("SeqVarTools")

In most cases, you don't need to download the package archive at all.

SeqVarTools

Tools for variant data

Bioconductor version: 2.14

An interface to the fast-access storage format for VCF data provided in SeqArray, with tools for common operations and analysis.

Author: Stephanie M. Gogarten, Xiuwen Zheng

Maintainer: Stephanie M. Gogarten <sdmorris at u.washington.edu>, Xiuwen Zheng <zhengx at u.washington.edu>

Citation (from within R, enter citation("SeqVarTools")):

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("SeqVarTools")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SeqVarTools")

PDF	R Script	Introduction to SeqVarTools
PDF		Reference Manual

biocViews	GeneticVariability, Genetics, SNP, Sequencing, Software
Version	1.2.0
In Bioconductor since	BioC 2.13 (R-3.0)
License	GPL-3
Depends	SeqArray(>= 1.1.1)
Imports	methods, GenomicRanges, IRanges, GWASExactHW
Suggests	BiocGenerics, RUnit
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

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