To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("CAFE")

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CAFE

Chromosmal Aberrations Finder in Expression data

Bioconductor version: 2.14

Detection and visualizations of gross chromosomal aberrations using Affymetrix expression microarrays as input

Author: Sander Bollen

Maintainer: Sander Bollen <sander.h.bollen at gmail.com>

Citation (from within R, enter citation("CAFE")):

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("CAFE")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CAFE")

biocViews	GeneExpression, GeneSetEnrichment, Microarray, OneChannel, Software
Version	1.0.0
In Bioconductor since	BioC 2.14 (R-3.1)
License	GPL-3
Depends	R (>= 2.10), biovizBase, GenomicRanges, IRanges, ggbio
Imports	affy, ggplot2, annotate, grid, gridExtra, tcltk, Biobase
Suggests	RUnit, BiocGenerics, BiocStyle
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

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